ok, it seems whole Warp3D is corrupted...
If I understand it correctly, the problem appeared after the installation of v1.02 update, right?
Let's make an elimination method again, please uninstall AmiKit completely and manualy delete rest of the files that remained in the AmiKit drawer and make a new installation of AmiKit 1.0. Test GLMatrix or gears_68k. If it works, install v1.02 update package and test it again. If it still works, install 1.03 update. Then, if the Warp3D still works, install first BoingBag, reset and test Warp3D again. Then install second BB and make a test again.
Please let me know the results. Like I said everything is OK here :-O